home.md

@@ -3,19 +3,21 @@ Python package to extract, analyse and visualize AMR data.
 usage: fl [-h] [--version] command [additional arguments]
 ```
 
+The code is in the process of transition to a new [library](CBlockGrid) to handle the AMR grid data. It is much cleaner, has more functionality and allows to use more options (pytables, pyhdf, hdftools) to read the hdf data. Some commands still use the old [flashproj](https://projects.asu.cas.cz/wunsch/flashscripts/-/blob/master/flashscripts/flashproj.py) and [flashpf](https://projects.asu.cas.cz/wunsch/flashscripts/-/blob/master/flashscripts/flashpf.py) libraries that will be removed later. 
+
 | command | description |
 | ------- | ----------- |
 | [conv](command-conv) | Converts (AMR) grid data to a uniform grid and writes it as ascii or fits file. |
 | [averages](command-averages) | Calculates averages and integrals per phases. |
 | [extremes](command-extremes) | Finds extremes (minima and maxima) of all values in the grid. |
 | [plot](command-plot) | Plots grid data using an external engine (e.g. gnuplot) using a predifined / user-defined template. |
-| [hist](command-hist) | Calculates histograms of quantities in the grid data. |
-| [hist_dT](command-hist_dT) | Calculates 2D histograms for density and temperature. |
-| [radav](command-radav) | Calculates radial profile, i.e. mean values over spherical shells. |
-| [lineprof](command-lineprof) | Calculates a line profile as a histogram of emissions according to radial velocities. |
+| [hist](command-hist) | Calculates histograms of quantities in the grid data. (old libs) |
+| [hist_dT](command-hist_dT) | Calculates 2D histograms for density and temperature. (old libs) |
+| [radav](command-radav) | Calculates radial profile, i.e. mean values over spherical shells. (old libs) |
+| [lineprof](command-lineprof) | Calculates a line profile as a histogram of emissions according to radial velocities. (old libs) |
 | [sink_sum](command-sink_sum) | Sum sink particles. |
 | [sink_conv](command-sink_conv) | Convert sink_evol.dat file into series of files correspoding to hdf plot files. |
-| [axial_avg](command-axial_avg) | Calculate average values over the cylindrical phi direction. |
+| [axial_avg](command-axial_avg) | Calculate average values over the cylindrical phi direction. (old libs) |
 | [timing](command-timing)  | Convert sink_evol.dat file into series of files correspoding to hdf plot files. |
 | [log](command-log) | Process logfile. |
 | [test](command-test) | Run automated tests. |