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Commit 85850767 authored by Michal Dovčiak's avatar Michal Dovčiak
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Add new reverberation model based on XILLVER tables by Javier Garcia. 

Add kynxilrev model.
Rename the package of kynrefrev and kynxilrev models to kynreverb.
parent b33445e0
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Showing with 4784 additions and 527 deletions
README.md
View file @ 85850767
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fft_reverberation.c
View file @ 85850767
......@@ -6,9 +6,16 @@
#define PI 3.14159265358979
#define PI2 6.28318530717959
extern int xs_write(char* wrtstr, int idest);
extern double t0, fwrap;
extern int exclude_energy;
//extern int xs_write(char* wrtstr, int idest);
//extern double t0, fwrap;
//extern int exclude_energy;
// Let's declare variables that can be seen from ide and FFT routine
double *del=NULL, t0, fwrap=0.;
float *radius=NULL;
long int nradius;
int exclude_energy=0;
void fft_reverberation(const double *ear, int ne, double *photar,
double frequency1, double frequency2, int photar_sw,
......@@ -16,7 +23,7 @@ void fft_reverberation(const double *ear, int ne, double *photar,
double *far, double *far_prim,
double *flux_bands, double *flux_bands_prim,
int nbands, double tot_time_sec,
double flare_duration_sec, char *cparam){
double flare_duration_sec, char *cparam, char *cname){
void four(double *data_r, double *data_im, long n1, int isign);
......@@ -70,12 +77,12 @@ FILE *fw1, *fw2, *fw3, *fw4, *fw5, *fw6;
//heap instead of on an available size-limited stack!
if ( ( data_r = (double *) malloc( nn * sizeof(double) ) ) == NULL ||
( data_im = (double *) malloc( nn * sizeof(double) ) ) == NULL ) {
xs_write("kynrefrev: Failed to allocate memory for tmp arrays.", 5);
xs_write("fft_reverberation: Failed to allocate memory for tmp arrays.", 5);
for (ie = 0; ie < ne; ie++) photar[ie] = 0.;
goto error;
}
if ( ( freq = (double *) malloc( (nn/2+1) * sizeof(double) ) ) == NULL ) {
xs_write("kynrefrev: Failed to allocate memory for tmp arrays.", 5);
xs_write("fft_reverberation: Failed to allocate memory for tmp arrays.", 5);
for (ie = 0; ie < ne; ie++) photar[ie] = 0.;
goto error;
}
......@@ -96,7 +103,7 @@ if( ( r_part = (double *) malloc( ne * (nn/2+1) * sizeof(double) ) ) == NULL |
( phase_tot_u2 = (double *) malloc( ne * (nn/2+1) * sizeof(double) ) ) == NULL ||
( ampl_tot_etot2 = (double *) malloc( ne * (nn/2+1) * sizeof(double) ) ) == NULL ||
( phase_tot_etot2 = (double *) malloc( ne * (nn/2+1) * sizeof(double) ) ) == NULL ) {
xs_write("kynrefrev: Failed to allocate memory for tmp arrays.", 5);
xs_write("fft_reverberation: Failed to allocate memory for tmp arrays.", 5);
for (ie = 0; ie < ne; ie++) photar[ie] = 0.;
goto error;
}
......@@ -112,7 +119,7 @@ if( nbands > 0 && (
( ampl_bands_tot = (double *) malloc( nbands * (nn/2+1) * sizeof(double) ) ) == NULL ||
( phase_bands_tot = (double *) malloc( nbands * (nn/2+1) * sizeof(double) ) ) == NULL ||
( phase_bands_tot_u1 = (double *) malloc( nbands * (nn/2+1) * sizeof(double) ) ) == NULL ) ){
xs_write("kynrefrev: Failed to allocate memory for tmp arrays.", 5);
xs_write("fft_reverberation: Failed to allocate memory for tmp arrays.", 5);
for (ie = 0; ie < ne; ie++) photar[ie] = 0.;
goto error;
}
......@@ -1319,17 +1326,17 @@ if( abs(photar_sw) > 10 && nbands > 0){
// Write the tables
// energy dependent Fourier transform
if(abs(photar_sw)<=10){
sprintf(filename, "kynrefrev_%s_real.dat",cparam);
sprintf(filename, "%s_%s_real.dat",cname,cparam);
fw1 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_imag.dat",cparam);
sprintf(filename, "%s_%s_imag.dat",cname,cparam);
fw2 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_ampl.dat",cparam);
sprintf(filename, "%s_%s_ampl.dat",cname,cparam);
fw3 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_phase.dat",cparam);
sprintf(filename, "%s_%s_phase.dat",cname,cparam);
fw4 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_phase_u1.dat",cparam);
sprintf(filename, "%s_%s_phase_u1.dat",cname,cparam);
fw5 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_phase_u2.dat",cparam);
sprintf(filename, "%s_%s_phase_u2.dat",cname,cparam);
fw6 = fopen(filename, "w");
for(ifr=0;ifr<=nn/2;ifr++){
for(ie=0;ie<ne;ie++){
......@@ -1355,15 +1362,15 @@ if(abs(photar_sw)<=10){
fclose(fw6);
}
// Fourier transform for chosen energy bands
sprintf(filename, "kynrefrev_%s_bands_real.dat",cparam);
sprintf(filename, "%s_%s_bands_real.dat",cname,cparam);
fw1 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_bands_imag.dat",cparam);
sprintf(filename, "%s_%s_bands_imag.dat",cname,cparam);
fw2 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_bands_ampl.dat",cparam);
sprintf(filename, "%s_%s_bands_ampl.dat",cname,cparam);
fw3 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_bands_phase.dat",cparam);
sprintf(filename, "%s_%s_bands_phase.dat",cname,cparam);
fw4 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_bands_phase_u1.dat",cparam);
sprintf(filename, "%s_%s_bands_phase_u1.dat",cname,cparam);
fw5 = fopen(filename, "w");
//sprintf(filename, "kynrefrev_%s_bands_phase_u2.dat",cparam);
//fw4 = fopen(filename, "w");
......@@ -1393,17 +1400,17 @@ fclose(fw4);
fclose(fw5);
// energy dependent Fourier transform when primary is included
if(abs(photar_sw)<=10){
sprintf(filename, "kynrefrev_%s_real_tot.dat",cparam);
sprintf(filename, "%s_%s_real_tot.dat",cname,cparam);
fw1 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_imag_tot.dat",cparam);
sprintf(filename, "%s_%s_imag_tot.dat",cname,cparam);
fw2 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_ampl_tot.dat",cparam);
sprintf(filename, "%s_%s_ampl_tot.dat",cname,cparam);
fw3 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_phase_tot.dat",cparam);
sprintf(filename, "%s_%s_phase_tot.dat",cname,cparam);
fw4 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_phase_tot_u1.dat",cparam);
sprintf(filename, "%s_%s_phase_tot_u1.dat",cname,cparam);
fw5 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_phase_tot_u2.dat",cparam);
sprintf(filename, "%s_%s_phase_tot_u2.dat",cname,cparam);
fw6 = fopen(filename, "w");
for(ifr=0;ifr<=nn/2;ifr++){
for(ie=0;ie<ne;ie++){
......@@ -1429,15 +1436,15 @@ if(abs(photar_sw)<=10){
fclose(fw6);
}
// Fourier transform for chosen energy bands when primary is included
sprintf(filename, "kynrefrev_%s_bands_real_tot.dat",cparam);
sprintf(filename, "%s_%s_bands_real_tot.dat",cname,cparam);
fw1 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_bands_imag_tot.dat",cparam);
sprintf(filename, "%s_%s_bands_imag_tot.dat",cname,cparam);
fw2 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_bands_ampl_tot.dat",cparam);
sprintf(filename, "%s_%s_bands_ampl_tot.dat",cname,cparam);
fw3 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_bands_phase_tot.dat",cparam);
sprintf(filename, "%s_%s_bands_phase_tot.dat",cname,cparam);
fw4 = fopen(filename, "w");
sprintf(filename, "kynrefrev_%s_bands_phase_tot_u1.dat",cparam);
sprintf(filename, "%s_%s_bands_phase_tot_u1.dat",cname,cparam);
fw5 = fopen(filename, "w");
for(ifr=0;ifr<=nn/2;ifr++){
fprintf(fw1, "%E\t", freq[ifr]);
......@@ -1465,7 +1472,7 @@ fclose(fw4);
fclose(fw5);
// frequency integrated energy dependent functions
if(abs(photar_sw)<=10){
sprintf(filename, "kynrefrev_%s_fft_tot_int.dat",cparam);
sprintf(filename, "%s_%s_fft_tot_int.dat",cname,cparam);
fw1 = fopen(filename, "w");
for(ie=0;ie<ne;ie++)
fprintf(fw1, "%E\t%E\t%E\t%E\t%E\t%E\t%E\t%E\t%E\t%E\t%E\t%E\t%E\n",
......@@ -1485,13 +1492,13 @@ if(abs(photar_sw)<=10){
im_part_tot_int_etot-im_part_tot_int[ie],
r_part_tot_int_etot- r_part_tot_int[ie]))/PI/freq_wrap0);
fclose(fw1);
sprintf(filename, "kynrefrev_%s_freq_wrap.dat",cparam);
sprintf(filename, "%s_%s_freq_wrap.dat",cname,cparam);
fw1 = fopen(filename, "w");
fprintf(fw1, "%E", freq_wrap0);
fclose(fw1);
// frequency band integrated Fourier transform
if( frequency1 > 0. && frequency1 < frequency2){
sprintf(filename, "kynrefrev_%s_fft_tot_fband.dat",cparam);
sprintf(filename, "%s_%s_fft_tot_fband.dat",cname,cparam);
fw1 = fopen(filename, "w");
for(ie=0;ie<ne;ie++)
fprintf(fw1, "%E\t%E\t%E\t%E\t%E\t%E\t%E\t%E\t%E\t%E\t%E\t%E\t%E\n",
......@@ -1871,3 +1878,17 @@ for (i=0;i<n1;i++) {
free((char*) (data));
}
#undef SWAP
/*******************************************************************************
*******************************************************************************/
double incgamma(double a, double x){
double gfunc;
long i;
gfunc=0.;
for(i=100000;i>=1;i--) gfunc=(a-i)*i/(2.*i+1.+x-a+gfunc);
gfunc = pow(x,a) * exp(-x) / (1.+x-a+gfunc);
return(gfunc);
}
/*******************************************************************************
*******************************************************************************/
lmodel-kynrefrev.dat → lmodel-kynreverb.dat
View file @ 85850767
......@@ -38,3 +38,44 @@ dt/Af s/- 0. -1e8 -1e8 1e8 1e8 -1.
k/qf " " 1. -1e8 -1e8 1e8 1e8 -1.
$xsw 16.
nthreads " " 4. 1. 1. 100. 100. -1.
kynxilrev 39 0. 1.0e20 c_KYNxilrev add 0
a/M GM/c 1. 0. 0. 1. 1. 0.2
theta_o deg 30. 0. 0. 89. 89. 5.
rin GM/c^2 1. 1. 1. 1000. 1000. -0.5
$ms 1.
rout GM/c^2 1000. 1. 1. 1000. 1000 -1.0
phi deg 0. -180. -180. 180. 180. -1.
dphi deg 360. 0. 0. 360. 360. -1.
M/M8 " " 0.1 1e-8 1e-8 1e+3 1e+3 5.
height GM/c^2 3. -20. -20. 100. 100. -1.
PhoIndex " " 2.0 1.2 1.2 3.4 3.4 -0.1
L/Ledd " " 0.001 0. 0. 1e+10 1e+10 10.
Np:Nr " " 1.0 0. 0. 10. 10. -0.1
density " " 1. 1. 1. 1e+4 1e+4 5.
den_prof " " 0. -5. -5. 0. 0. 0.1
abun " " 1. 0.5 0.5 20. 20. 0.1
Ecut keV 300. 5. 5. 1000. 1000. -10.
therm " " 0. -2. -2. 2. 2. -0.1
arate Ledd 0.1 1.e-5 1.e-5 100. 100. -0.1
f_col " " 2.4 1. 1. 3. 3. -0.1
alpha GM/c^2 -6. -100. -100. 100. 100. 1.
beta GM/c^2 0. -100. -100. 100. 100. 1.
rcloud GM/c^2 0. 0. 0. 100. 100. 1.
zshift " " 0. -0.999 -0.999 10. 10. -0.1
limb " " 0. 0. 0. 2. 2. -1.
$tab 11.
ntable " " 80. 0. 0. 99. 99. -1.
nrad " " -4488. -10000. -10000. 10000. 10000. -100.
division " " -1. 0. 0. 1. 1. -1.
nphi " " 180. 1. 1. 20000. 20000. -100.
deltaT GM/c^3 1. 1e-3 1e-3 10. 10. -0.05
nt_ratio " " 1. 1. 1. 10. 10. -1.
t1/f1/E1 s/Hz/keV 0.3 -1e8 -1e8 1e16 1e16 -1.
t2/f2/E2 s/Hz/keV 0.8 -1e8 -1e8 1e16 1e16 -1.
Eref1 keV 1. -1. -1. 100. 100. -1.
Eref2 keV 3. 0. 0. 100. 100. -1.
dt/Af s/- 0. -1e8 -1e8 1e8 1e8 -1.
k/qf " " 1. -1e8 -1e8 1e8 1e8 -1.
$xsw 16.
nthreads " " 4. 1. 1. 100. 100. -1.
other/Makefile
View file @ 85850767
SRC_KYNREFREV=xside_threads.c xside.c libxspec.c fft_reverberation.c xskynrefrev.c
SRC_KYNXILREV=xside_threads.c xside.c libxspec.c fft_reverberation.c xskynxilrev.c
CC=gcc
INCLUDE=-I/usr/local/share/heasoft/x86_64-unknown-linux-gnu-libc2.19/include
......@@ -8,3 +9,6 @@ CFLAGS=-fPIC -O3 -Wall -DOUTSIDE_XSPEC -lm
kynrefrev: $(SRC_KYNREFREV)
$(CC) $(CFLAGS) $(INCLUDE) -o $@ $(SRC_KYNREFREV) $(LIBRARY_PATH) $(LIBRARY)
kynxilrev: $(SRC_KYNXILREV)
$(CC) $(CFLAGS) $(INCLUDE) -o $@ $(SRC_KYNXILREV) $(LIBRARY_PATH) $(LIBRARY)
xside.c
View file @ 85850767
......@@ -2069,13 +2069,12 @@ while(iiloop<(iloop+nloops) && iiloop<=(nrad*nphi)){
}//next iiloop
error:
if(far_loc != NULL); free((void *) far_loc); far_loc = NULL;
if(far_loc != NULL){free((void *) far_loc); far_loc = NULL;}
if(polar){
if(qar_loc != NULL); free((void *) qar_loc); qar_loc = NULL;
if(uar_loc != NULL); free((void *) uar_loc); uar_loc = NULL;
if(var_loc != NULL); free((void *) var_loc); var_loc = NULL;
if(qar_loc != NULL){free((void *) qar_loc); qar_loc = NULL;}
if(uar_loc != NULL){free((void *) uar_loc); uar_loc = NULL;}
if(var_loc != NULL){free((void *) var_loc); var_loc = NULL;}
}
return;
}
/*******************************************************************************
......
xskynrefrev.c
View file @ 85850767
......@@ -567,10 +567,10 @@ return(0);
#define EC 300.
// Let's declare variables that can be seen from ide and FFT routine
double *del=NULL, t0, fwrap=0.;
float *radius=NULL;
long int nradius;
int exclude_energy=0;
extern double *del, t0, fwrap;
extern float *radius;
extern long int nradius;
extern int exclude_energy;
/* Let's declare variables that are common for the main and emissivity
subroutines */
......@@ -588,7 +588,7 @@ extern char* FGMODF(void);
extern char* FGMSTR(char* dname);
extern void FPMSTR(const char* value1, const char* value2);
extern int xs_write(char* wrtstr, int idest);
//extern double incgamma(double a, double x);
extern double incgamma(double a, double x);
//extern void cutoffpl(double *ear, int ne, double *param, double *photar);
void KYNrefrev(double *ear_xspec, int ne_xspec, const double *param,
......@@ -605,7 +605,8 @@ extern void fft_reverberation(const double *ear, int ne, double *photar,
long nn, long nt, double *far, double *far_prim,
double *flux_bands, double *flux_bands_prim,
int nbands, double tot_time_sec,
double flare_duration_sec, char *cparam);
double flare_duration_sec, char *cparam,
char *cname);
void emis_KYNrefrev(double** ear_loc, const int ne_loc, const long nt,
......@@ -615,7 +616,7 @@ void emis_KYNrefrev(double** ear_loc, const int ne_loc, const long nt,
const double alpha_o, const double beta_o,
const double delay, const double g);
double incgamma(double a, double x);
//double incgamma(double a, double x);
/* Let's declare static variables whose values should be remembered for next
......@@ -637,7 +638,7 @@ FILE *fw;
char errortxt[255], filename[255];
char reflion[255], text[255];
char kyxiin[32], kyxiout[32], kyLxLamp[32], kyRefl[32], kyfwrap[32];
char cparam[12];
char cparam[12], cname[10];
double ide_param[25];
double ear_short[4];
double *time=NULL;
......@@ -697,6 +698,7 @@ int ihorizon, irow, anynul, status = 0;
sprintf(cparam, "%3ld_%02ld_%04ld",
lround(100.*(1.+sqrt(1.-param[0]*param[0]))),
lround(param[1]),lround(10.*param[8]));
sprintf(cname, "kynrefrev");
// am - black hole angular momentum
ide_param[0] = param[0];
am = ide_param[0];
......@@ -1215,7 +1217,7 @@ if(first_h) {
if (status) {
if (status) ffrprt(stderr, status);
ffclos(fptr, &status);
xs_write("\nkynrefionx: set the KYDIR to the directory with the KY tables.", 5);
xs_write("\nkynrefrev: set the KYDIR to the directory with the KY tables.", 5);
for (ie = 0; ie < ne_xspec; ie++) photar[ie] = 0.;
goto error;
}
......@@ -1561,23 +1563,23 @@ if ((strcmp(kydir, FGMSTR(pname)) != 0) || (rix != rix_old) || first_rix) {
if (status) {
if (status) ffrprt(stderr, status);
ffclos(fptr, &status);
xs_write("\nkynrefionx: set the KYDIR to the directory with the KY tables.", 5);
xs_write("\nkynrefrev: set the KYDIR to the directory with the KY tables.", 5);
for (ie = 0; ie < ne_xspec; ie++) photar[ie] = 0.;
goto error;
}
if (((strcmp(kydir, FGMSTR(pname)) != 0) || (rix != rix_old)) && !first_rix) {
// Free memory from tmp arrays...
if(abun != NULL); free((void *) abun); abun = NULL;
if(gam != NULL); free((void *) gam); gam = NULL;
if(xi != NULL); free((void *) xi); xi = NULL;
if(logxi != NULL); free((void *) logxi); logxi = NULL;
if(energy0 != NULL); free((void *) energy0); energy0 = NULL;
if(emission != NULL); free((void *) emission); emission = NULL;
if(flux0 != NULL); free((void *) flux0); flux0 = NULL;
if(flux1 != NULL); free((void *) flux1); flux1 = NULL;
if(energy1 != NULL); free((void *) energy1); energy1 = NULL;
if(energy2 != NULL); free((void *) energy2); energy2 = NULL;
if(flx != NULL); free((void *) flx); flx = NULL;
if(abun != NULL){ free((void *) abun); abun = NULL;}
if(gam != NULL){ free((void *) gam); gam = NULL;}
if(xi != NULL){ free((void *) xi); xi = NULL;}
if(logxi != NULL){ free((void *) logxi); logxi = NULL;}
if(energy0 != NULL){ free((void *) energy0); energy0 = NULL;}
if(emission != NULL){ free((void *) emission); emission = NULL;}
if(flux0 != NULL){ free((void *) flux0); flux0 = NULL;}
if(flux1 != NULL){ free((void *) flux1); flux1 = NULL;}
if(energy1 != NULL){ free((void *) energy1); energy1 = NULL;}
if(energy2 != NULL){ free((void *) energy2); energy2 = NULL;}
if(flx != NULL){ free((void *) flx); flx = NULL;}
}
// Let's read tables (binary tables => hdutype=2)
// Move to the first extension ('PARAMETERS')
......@@ -2248,7 +2250,7 @@ if(photar_sw){
// Compute the Fourier transform
fft_reverberation(ear_xspec, ne_xspec, photar, frequency1, frequency2, photar_sw,
time, nn, nt, far, far_prim, flux_bands, flux_bands_prim,
nbands, tot_time_sec, flare_duration_sec, cparam);
nbands, tot_time_sec, flare_duration_sec, cparam, cname);
sprintf(kyfwrap, "%e", fwrap);
FPMSTR(pkyfwrap, kyfwrap);
if(photar_sw == 5 || photar_sw == 7) for(ie=0;ie<ne;ie++)photar[ie] *= ampl_ampl;
......@@ -2328,16 +2330,16 @@ fclose(fw);
error:
//Let's free all allocated arrays
if (time != NULL){free((void *) time); time = NULL;}
if (far != NULL){free((void *) far); far = NULL;}
if (far_final != NULL){free((void *) far_final); far_final = NULL;}
if (flux != NULL){free((void *) flux); flux = NULL;}
if (flux_bands != NULL){free((void *) flux_bands); flux_bands = NULL;}
if (spectrum != NULL){free((void *) spectrum); spectrum = NULL;}
if (far_prim != NULL){free((void *) far_prim); far_prim = NULL;}
if (spectrum_prim != NULL){free((void *) spectrum_prim); spectrum_prim = NULL;}
if (photar1 != NULL){free((void *) photar1); photar1 = NULL;}
if (gf != NULL){free((void *) gf); gf = NULL;}
if (time != NULL){ free((void *) time); time = NULL;}
if (far != NULL){ free((void *) far); far = NULL;}
if (far_final != NULL){ free((void *) far_final); far_final = NULL;}
if (flux != NULL){ free((void *) flux); flux = NULL;}
if (flux_bands != NULL){ free((void *) flux_bands); flux_bands = NULL;}
if (spectrum != NULL){ free((void *) spectrum); spectrum = NULL;}
if (far_prim != NULL){ free((void *) far_prim); far_prim = NULL;}
if (spectrum_prim != NULL){ free((void *) spectrum_prim); spectrum_prim = NULL;}
if (photar1 != NULL){ free((void *) photar1); photar1 = NULL;}
if (gf != NULL){ free((void *) gf); gf = NULL;}
////if (ear1 != NULL){free((void *) ear1); ear1 = NULL;}
return;
......@@ -2392,116 +2394,116 @@ if ((ir0 == 0) || (ir0 >= nradius)) {
// Let's interpolate delay between two radii
delay0 = ttmp * del[ir0] + ttmp1 * del[ir0 - 1];
if((delay0+delay-t0 > nt*dt) || (t0-delay0-delay > flare_duration_rg)){
for(it=0; it < nt; it++) far_loc[ne_loc+(ne_loc+1)*it]=0.;
}else{
// Let's interpolate gfactor between two radii
gfactor = ttmp * gfac[ir0] + ttmp1 * gfac[ir0 - 1];
// Let's interpolate cosmu0 between two radii
// cosmu0 = ttmp * cosin[ir0] + ttmp1 * cosin[ir0 - 1];
// Let's interpolate lensing between two radii
lensing = (ttmp * transf_d[ir0] + ttmp1 * transf_d[ir0 - 1]) *
h * sqrt(1. - 2. * h / (h * h + am2)) / (r * r + h * h) / r;
// Let's compute the emitted flux at the particular radius
if (lensing != 0.) {
if(sw == 1) Finc = Np * LEDD / RG2 / mass * lensing * gfactor;
else Finc = Np * LEDD / RG2 / mass * lensing * pow(gfactor, gamma0 - 1.);
if(nH0 > 0.){
if (qn != 0.) ionisation = log10( Finc / ( nH0 * 1e15 * pow(r, qn) ) );
else ionisation = log10( Finc / ( nH0 * 1e15 ) );
factor1 = 1.;
} else{
ionisation = log10(-nH0) + qn * log10(r);
factor1 = Finc / 1e15 / (-nH0) / pow(r,qn);
}
// given ionisation, find the corresponding index in logXi():
imin = 0;
imax = nxi;
ixi0 = nxi / 2;
while ((imax - imin) > 1) {
if (ionisation >= logxi[ixi0 - 1]) imin = ixi0;
else imax = ixi0;
ixi0 = (imin + imax) / 2;
}
if (ixi0 == 0) ixi0 = 1;
ttmp = (ionisation - logxi[ixi0 - 1]) / (logxi[ixi0] - logxi[ixi0 - 1]);
if (ttmp < 0.) {
ttmp = 0.;
factor1 *= pow(10, ionisation - logxi[0]);
}
if (ttmp > 1.) {
ttmp = 1.;
factor1 *= pow(10, ionisation - logxi[nxi - 1]);
}
ttmp1 = 1. - ttmp;
for (ie = 0; ie < ne_loc; ie++) {
y1 = flux1[ie + ne_loc * (ixi0 - 1)];
y2 = flux1[ie + ne_loc * ixi0];
factor2 = exp( energy1[ie] / EC * (1.-1./gfactor) );
fluxe[ie] = (ttmp1 * y1 + ttmp * y2) * factor * factor1 * factor2;
if (sw == 1) fluxe[ie] *= pow(gfactor, gamma0 - 2.);
if (nH0 > 0. && qn != 0.) fluxe[ie] *= pow(r, qn);
}
// add the thermal component
if(thermalisation != 0.){
// compute thermalised total flux (Ftherm = Finc - Frefl
// or Ftherm = thermalisation * Finc)...
// incident flux in SI units ( i.e. J / s / m^2 )
Finc *= ( 1e-3 / 4. / PI );
if( fabs(thermalisation) <= 1. ) Ftherm = fabs(thermalisation) * Finc;
else{
// reflected flux in SI units
Frefl=0.;
ttmp = fluxe[0] * (*(*ear_loc));
for (ie = 1; ie < ne_loc; ie++){
ttmp1 = fluxe[ie] * (*(*ear_loc+ie));
Frefl += (ttmp + ttmp1) / 2. * ((*(*ear_loc+ie))-(*(*ear_loc+ie-1)));
ttmp = ttmp1;
for(it=0; it < nt; it++) far_loc[ne_loc+(ne_loc+1)*it]=0.;
}else{
// Let's interpolate gfactor between two radii
gfactor = ttmp * gfac[ir0] + ttmp1 * gfac[ir0 - 1];
// Let's interpolate cosmu0 between two radii
// cosmu0 = ttmp * cosin[ir0] + ttmp1 * cosin[ir0 - 1];
// Let's interpolate lensing between two radii
lensing = (ttmp * transf_d[ir0] + ttmp1 * transf_d[ir0 - 1]) *
h * sqrt(1. - 2. * h / (h * h + am2)) / (r * r + h * h) / r;
// Let's compute the emitted flux at the particular radius
if (lensing != 0.) {
if(sw == 1) Finc = Np * LEDD / RG2 / mass * lensing * gfactor;
else Finc = Np * LEDD / RG2 / mass * lensing * pow(gfactor, gamma0 - 1.);
if(nH0 > 0.){
if (qn != 0.) ionisation = log10( Finc / ( nH0 * 1e15 * pow(r, qn) ) );
else ionisation = log10( Finc / ( nH0 * 1e15 ) );
factor1 = 1.;
} else{
ionisation = log10(-nH0) + qn * log10(r);
factor1 = Finc / 1e15 / (-nH0) / pow(r,qn);
}
// given ionisation, find the corresponding index in logXi():
imin = 0;
imax = nxi;
ixi0 = nxi / 2;
while ((imax - imin) > 1) {
if (ionisation >= logxi[ixi0 - 1]) imin = ixi0;
else imax = ixi0;
ixi0 = (imin + imax) / 2;
}
if (ixi0 == 0) ixi0 = 1;
ttmp = (ionisation - logxi[ixi0 - 1]) / (logxi[ixi0] - logxi[ixi0 - 1]);
if (ttmp < 0.) {
ttmp = 0.;
factor1 *= pow(10, ionisation - logxi[0]);
}
if (ttmp > 1.) {
ttmp = 1.;
factor1 *= pow(10, ionisation - logxi[nxi - 1]);
}
ttmp1 = 1. - ttmp;
for (ie = 0; ie < ne_loc; ie++) {
y1 = flux1[ie + ne_loc * (ixi0 - 1)];
y2 = flux1[ie + ne_loc * ixi0];
factor2 = exp( energy1[ie] / EC * (1.-1./gfactor) );
fluxe[ie] = (ttmp1 * y1 + ttmp * y2) * factor * factor1 * factor2;
if (sw == 1) fluxe[ie] *= pow(gfactor, gamma0 - 2.);
if (nH0 > 0. && qn != 0.) fluxe[ie] *= pow(r, qn);
}
// add the thermal component
if(thermalisation != 0.){
// compute thermalised total flux (Ftherm = Finc - Frefl
// or Ftherm = thermalisation * Finc)...
// incident flux in SI units ( i.e. J / s / m^2 )
Finc *= ( 1e-3 / 4. / PI );
if( fabs(thermalisation) <= 1. ) Ftherm = fabs(thermalisation) * Finc;
else{
// reflected flux in SI units
Frefl=0.;
ttmp = fluxe[0] * (*(*ear_loc));
for (ie = 1; ie < ne_loc; ie++){
ttmp1 = fluxe[ie] * (*(*ear_loc+ie));
Frefl += (ttmp + ttmp1) / 2. * ((*(*ear_loc+ie))-(*(*ear_loc+ie-1)));
ttmp = ttmp1;
}
Frefl *= KEV * 1e4;
// fprintf(stdout,"%lg\n", Frefl / Finc);
if(Finc < Frefl){
sprintf(errortext,
"kynrefrev: reflection is larger than illumination at radius %lg GM/c^2!",
r);
xs_write(errortext, 5);
Frefl=Finc;
}
Ftherm = Finc - Frefl;
}
Frefl *= KEV * 1e4;
// fprintf(stdout,"%lg\n", Frefl / Finc);
if(Finc < Frefl){
sprintf(errortext,
"kynrefrev: reflection is larger than illumination at radius %lg GM/c^2!",
r);
xs_write(errortext, 5);
Frefl=Finc;
// compute the temperature of the accretion disc
x = sqrt(r);
Ccal = 1. - 3. / (x*x) + 2. * am / (x * x * x);
if(am < 1.)
Lcal = 1. / x * (x - x0 - 1.5 * am * log(x / x0) -
3. * pow(x1 - am,2.)/x1/(x1 - x2)/(x1 - x3) * log((x - x1)/(x0 - x1))-
3. * pow(x2 - am,2.)/x2/(x2 - x1)/(x2 - x3) * log((x - x2)/(x0 - x2))-
3. * pow(x3 - am,2.)/x3/(x3 - x1)/(x3 - x2) * log((x - x3)/(x0 - x3)));
else Lcal = 1. / x * (x - 1 + 1.5 * log((x + 2.) / 3. / x));
temp = Tnorm * pow(x, -1.5) * pow( arate / mass2 * Lcal / Ccal, 0.25 );
// compute new temperature
Fbb = SIGMA * pow( temp / K_KEVK / f_col, 4. );
temp_new = K_KEVK * pow( ( Fbb + Ftherm ) / SIGMA, 0.25 ) * f_col;
// compute the additional flux due to thermalisation (i.e. "above"
// the stationary thermal flux)
for(ie = 0; ie < ne_loc; ie++){
flux_thermal = flx[ie] * ( 1. / (exp((*(*ear_loc+ie)) / temp_new) - 1.)
- 1. / (exp((*(*ear_loc+ie)) / temp) - 1.) );
if( thermalisation < 0. ) fluxe[ie] = flux_thermal;
else fluxe[ie] += flux_thermal;
}
Ftherm = Finc - Frefl;
}
// compute the temperature of the accretion disc